PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GSMUA_Achr3P11110_001
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Musa
Family bHLH
Protein Properties Length: 394aa    MW: 43278.9 Da    PI: 8.5765
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GSMUA_Achr3P11110_001genomeCIRADView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH39.31.2e-12327372655
                            HHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
                    HLH   6 nerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                            +++Er RR +i +++ +L+el+P+     +k  + a++L +Av+YI++Lq
  GSMUA_Achr3P11110_001 327 SIAERVRRTKISERIRKLQELVPNM----DKQTNTADMLDLAVDYIHDLQ 372
                            689*********************7....688*****************9 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088814.907321371IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474594.97E-16324383IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000832.17E-12325376No hitNo description
Gene3DG3DSA:4.10.280.103.4E-15326380IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003531.2E-13327377IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000109.4E-10327372IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 394 aa     Download sequence    Send to blast
MAALQLWPVY VCPSADCPTL DSARRGGETK EVMYGSPLAS SSSSKGLNLS HAPTVPFGGH  60
REEDAASELF RGHPHHHHHQ QMNPGLLRYR SAPSSLFEDP CENSLRATLL SAETENKGGT  120
VGCQRSPQFR QPPPVLSSEM VSSQQRPAYS SALPTMYHHS QQQLQMHNMP NHSLAEISQR  180
AVGSMATEMQ RIENGAGRNS TSLTRQSSSP AGLFSPLDVD AGYGKMMGLD GFGNGDLLPM  240
GDAANRLKDQ MSFLPRQNSL MSKIPELGSE EVQNGGMMMK HVSGLRHQLS LPKTSSEMAA  300
VENFLQFQDA VPCRTRAKRG CATHPRSIAE RVRRTKISER IRKLQELVPN MDKQTNTADM  360
LDLAVDYIHD LQKQVKALTE GRASCTCSRS KQQS
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009391823.10.0PREDICTED: transcription factor bHLH130-like
TrEMBLM0SDM80.0M0SDM8_MUSAM; Uncharacterized protein
STRINGGSMUA_Achr3P11110_0010.0(Musa acuminata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP188438103
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G42280.15e-59bHLH family protein